BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008A04SP1|AL425790
(784 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1648 1543 0.0
>3x_Contig1648
Length = 16375
Score = 1543 bits (778), Expect = 0.0
Identities = 782/784 (99%)
Strand = Plus / Plus
Query: 1 tctctggacacggtatccttccttggatccttgatataagcttcacccttctcgttgaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11986 tctctggacacggtatccttccttggatccttgatataagcttcacccttctcgttgaca 12045
Query: 61 tctgcgacacctttagggaaacatttcacaaatttcttggcatcatcaccggtgataggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12046 tctgcgacacctttagggaaacatttcacaaatttcttggcatcatcaccggtgataggc 12105
Query: 121 tgtgtgatctggatgtgtggtaatagtctataactagctgtcgacaccggagagaacttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12106 tgtgtgatctggatgtgtggtaatagtctataactagctgtcgacaccggagagaacttg 12165
Query: 181 gcatggtctgcaccgatacctagaatacaatgtgcccttaacgaaatctcttgacctggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12166 gcatggtctgcaccgatacctagaatacaatgtgcccttaacgaaatctcttgacctggt 12225
Query: 241 ctcaacttggccaacaagatatctggatccgctgccaccacgggacacttggcaaattgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12226 ctcaacttggccaacaagatatctggatccgctgccaccacgggacacttggcaaattgt 12285
Query: 301 tccacctgtttcccctgaggctcaaacttaaggtccctagcatagatatgcgcgtttcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12286 tccacctgtttcccctgaggctcaaacttaaggtccctagcatagatatgcgcgtttcta 12345
Query: 361 taaagaaccttggggtcttcacaatcctttggagcatctgggttcctggtacatttcacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12346 taaagaaccttggggtcttcacaatcctttggagcatctgggttcctggtacatttcacg 12405
Query: 421 ttcaacgacatcactatcgtattttcatctgtdaacctttcagattcgggcaatgacgtg 480
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 12406 ttcaacgacatcactatcgtattttcatctgtaaacctttcagattcgggcaatgacgtg 12465
Query: 481 tccacccaactcaacatatctggatccaccttcaatggcactaacccgattctatgcgcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12466 tccacccaactcaacatatctggatccaccttcaatggcactaacccgattctatgcgcc 12525
Query: 541 aacacttcgtcctgtagcacagacgtattgttaaaaaagtagacgtattctggagcgaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12526 aacacttcgtcctgtagcacagacgtattgttaaaaaagtagacgtattctggagcgaca 12585
Query: 601 gatggtacttctgagatcataatacgacggaaagcgttagaatcgatgtgtcgacatgaa 660
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 12586 gatggtacttctgagatcataatacgacggaaagcgttacaatcgatgtgtcgacatgaa 12645
Query: 661 ccaaatcgaaattcacttcacgctcatccaaactctcgatttgtacgtcaaaagtttcct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12646 ccaaatcgaaattcacttcacgctcatccaaactctcgatttgtacgtcaaaagtttcct 12705
Query: 721 tgaacttctccaagtcccatgaattgtcttgatccgaactaaatccagggaaatctgttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12706 tgaacttctccaagtcccatgaattgtcttgatccgaactaaatccagggaaatctgttg 12765
Query: 781 aact 784
||||
Sbjct: 12766 aact 12769
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4457
Number of Sequences: 1807
Number of extensions: 4457
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 784
length of database: 10,358,551
effective HSP length: 16
effective length of query: 768
effective length of database: 10,329,639
effective search space: 7933162752
effective search space used: 7933162752
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)